Protein–RNA interactions for Protein: A0A0B4J1H7

Igkv1-135, Immunoglobulin kappa variable 1-135 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-135A0A0B4J1H7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.47■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Igkv1-135A0A0B4J1H7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.47■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.46■□□□□ 0.39
Igkv1-135A0A0B4J1H7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-135A0A0B4J1H7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv1-135A0A0B4J1H7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.42■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.42■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.41■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv1-135A0A0B4J1H7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv1-135A0A0B4J1H7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms