Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav6d-5A0A075B6B9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-5A0A075B6B9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-5A0A075B6B9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-5A0A075B6B9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-5A0A075B6B9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-5A0A075B6B9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav6d-5A0A075B6B9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trav6d-5A0A075B6B9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav6d-5A0A075B6B9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav6d-5A0A075B6B9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav6d-5A0A075B6B9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-5A0A075B6B9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-5A0A075B6B9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-5A0A075B6B9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-5A0A075B6B9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-5A0A075B6B9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.71■□□□□ 0.27
Trav6d-5A0A075B6B9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav6d-5A0A075B6B9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav6d-5A0A075B6B9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-5A0A075B6B9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.69■□□□□ 0.26
Trav6d-5A0A075B6B9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav6d-5A0A075B6B9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trav6d-5A0A075B6B9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-5A0A075B6B9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav6d-5A0A075B6B9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav6d-5A0A075B6B9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav6d-5A0A075B6B9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav6d-5A0A075B6B9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-5A0A075B6B9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-5A0A075B6B9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-5A0A075B6B9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-5A0A075B6B9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-5A0A075B6B9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-5A0A075B6B9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-5A0A075B6B9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav6d-5A0A075B6B9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-5A0A075B6B9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav6d-5A0A075B6B9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-5A0A075B6B9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-5A0A075B6B9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-5A0A075B6B9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav6d-5A0A075B6B9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-5A0A075B6B9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-5A0A075B6B9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6d-5A0A075B6B9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms