Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav13d-1A0A075B606 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav13d-1A0A075B606 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.06■□□□□ 0
Trav13d-1A0A075B606 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13d-1A0A075B606 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-1A0A075B606 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13d-1A0A075B606 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Trav13d-1A0A075B606 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.03■□□□□ -0
Trav13d-1A0A075B606 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav13d-1A0A075B606 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-1A0A075B606 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav13d-1A0A075B606 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-1A0A075B606 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.02■□□□□ -0
Trav13d-1A0A075B606 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13d-1A0A075B606 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13d-1A0A075B606 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav13d-1A0A075B606 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav13d-1A0A075B606 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Gm9847-201ENSMUST00000052528 599 ntBASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13d-1A0A075B606 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-1A0A075B606 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-1A0A075B606 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15□□□□□ -0.01
Trav13d-1A0A075B606 Gm13241-201ENSMUST00000094493 780 ntBASIC15□□□□□ -0.01
Trav13d-1A0A075B606 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-1A0A075B606 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-1A0A075B606 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-1A0A075B606 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13d-1A0A075B606 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.99□□□□□ -0.01
Trav13d-1A0A075B606 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13d-1A0A075B606 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms