Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-6A0A075B603 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav6-6A0A075B603 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-6A0A075B603 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-6A0A075B603 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav6-6A0A075B603 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-6A0A075B603 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-6A0A075B603 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav6-6A0A075B603 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-6A0A075B603 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-6A0A075B603 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav6-6A0A075B603 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-6A0A075B603 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-6A0A075B603 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-6A0A075B603 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-6A0A075B603 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-6A0A075B603 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-6A0A075B603 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-6A0A075B603 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-6A0A075B603 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-6A0A075B603 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-6A0A075B603 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-6A0A075B603 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.22■□□□□ 0.03
Trav6-6A0A075B603 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms