Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm11439-201ENSMUST00000118598 409 ntBASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm3332-201ENSMUST00000189337 928 ntBASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Upk3aQ9JKX8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk3aQ9JKX8 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.52□□□□□ -0.56
Upk3aQ9JKX8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk3aQ9JKX8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Upk3aQ9JKX8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.52□□□□□ -0.56
Upk3aQ9JKX8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Upk3aQ9JKX8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Upk3aQ9JKX8 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Upk3aQ9JKX8 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Gm23596-201ENSMUST00000104304 132 ntBASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Gm4310-201ENSMUST00000177847 889 ntBASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Gm807-202ENSMUST00000224929 408 ntBASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Upk3aQ9JKX8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Upk3aQ9JKX8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms