Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk1aQ9D132 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm7809-201ENSMUST00000153199 742 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm25261-201ENSMUST00000157416 134 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm18711-201ENSMUST00000199341 750 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.35□□□□□ -0.59
Upk1aQ9D132 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Upk1aQ9D132 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.34□□□□□ -0.59
Upk1aQ9D132 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Gm25927-201ENSMUST00000175058 117 ntBASIC11.34□□□□□ -0.59
Upk1aQ9D132 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Gm3890-201ENSMUST00000182416 207 ntBASIC11.34□□□□□ -0.59
Upk1aQ9D132 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.34□□□□□ -0.59
Upk1aQ9D132 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.34□□□□□ -0.59
Upk1aQ9D132 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Upk1aQ9D132 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Upk1aQ9D132 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Upk1aQ9D132 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms