Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Gm26083-201ENSMUST00000157904 193 ntBASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.71□□□□□ -0.37
Rpa3Q9CQ71 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Rpa3Q9CQ71 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm26361-201ENSMUST00000158868 186 ntBASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm5706-201ENSMUST00000181525 993 ntBASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rpa3Q9CQ71 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa3Q9CQ71 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms