Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.58□□□□□ -0.72
Scrt1Q99M85 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.58□□□□□ -0.72
Scrt1Q99M85 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.58□□□□□ -0.72
Scrt1Q99M85 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Scrt1Q99M85 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scrt1Q99M85 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm14921-201ENSMUST00000118643 908 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm11941-201ENSMUST00000119904 610 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm37905-201ENSMUST00000195310 341 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm44124-201ENSMUST00000204159 472 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.57□□□□□ -0.72
Scrt1Q99M85 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Scrt1Q99M85 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.56□□□□□ -0.72
Scrt1Q99M85 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm13047-201ENSMUST00000117116 815 ntBASIC10.56□□□□□ -0.72
Scrt1Q99M85 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms