Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.93□□□□□ -0.18
Smc1bQ920F6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Gm9230-201ENSMUST00000188228 532 ntBASIC13.92□□□□□ -0.18
Smc1bQ920F6 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.92□□□□□ -0.18
Smc1bQ920F6 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.92□□□□□ -0.18
Smc1bQ920F6 Gm1821-202ENSMUST00000227415 750 ntBASIC13.92□□□□□ -0.18
Smc1bQ920F6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.92□□□□□ -0.18
Smc1bQ920F6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.92□□□□□ -0.18
Smc1bQ920F6 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smc1bQ920F6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Gm11675-201ENSMUST00000121873 832 ntBASIC13.91□□□□□ -0.18
Smc1bQ920F6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Gm16296-201ENSMUST00000159905 325 ntBASIC13.91□□□□□ -0.18
Smc1bQ920F6 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.91□□□□□ -0.18
Smc1bQ920F6 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.91□□□□□ -0.18
Smc1bQ920F6 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Gm21811-201ENSMUST00000096485 930 ntBASIC13.91□□□□□ -0.18
Smc1bQ920F6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smc1bQ920F6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms