Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdha3Q91Y16 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Mir433-201ENSMUST00000093564 124 ntBASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdha3Q91Y16 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdha3Q91Y16 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdha3Q91Y16 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdha3Q91Y16 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdha3Q91Y16 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdha3Q91Y16 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm14017-201ENSMUST00000121934 386 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm18212-201ENSMUST00000211678 889 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdha3Q91Y16 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms