Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm6334-201ENSMUST00000207083 228 ntBASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm8712-201ENSMUST00000221090 701 ntBASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Cts7-204ENSMUST00000225321 1257 ntBASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm10312-201ENSMUST00000078515 489 ntBASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdha8Q91Y12 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Mir8109-201ENSMUST00000184375 117 ntBASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Gm3096-201ENSMUST00000185770 364 ntBASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Gm19994-201ENSMUST00000217086 586 ntBASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdha8Q91Y12 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Pcdha8Q91Y12 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdha8Q91Y12 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms