Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Gm44967-201ENSMUST00000207047 631 ntBASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Top1mtQ8R4U6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm17376-201ENSMUST00000166016 84 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm25700-201ENSMUST00000177693 110 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm27320-201ENSMUST00000184892 109 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Top1mtQ8R4U6 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.33□□□□□ -0.11
Top1mtQ8R4U6 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Top1mtQ8R4U6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Top1mtQ8R4U6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Top1mtQ8R4U6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Top1mtQ8R4U6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Gm13296-201ENSMUST00000117854 997 ntBASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Top1mtQ8R4U6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms