Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Gm10312-201ENSMUST00000078515 489 ntBASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cchcr1Q8K2I2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 AY702102-202ENSMUST00000194651 1173 ntBASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Olfr284-202ENSMUST00000206647 966 ntBASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gm10608-202ENSMUST00000213924 676 ntBASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cchcr1Q8K2I2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gm14644-201ENSMUST00000116671 647 ntBASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gm11222-201ENSMUST00000119005 738 ntBASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gm8062-201ENSMUST00000139696 444 ntBASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gm9230-201ENSMUST00000188228 532 ntBASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Gm18054-201ENSMUST00000207539 555 ntBASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cchcr1Q8K2I2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms