Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Gm40466-201ENSMUST00000212174 422 ntBASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc28aQ8CEI3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc28aQ8CEI3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Gm11478-201ENSMUST00000117851 599 ntBASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.62□□□□□ -0.39
Ccdc28aQ8CEI3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms