Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trub1Q8C0D0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm15276-201ENSMUST00000145953 498 ntBASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm45224-201ENSMUST00000208203 414 ntBASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.37□□□□□ -0.43
Trub1Q8C0D0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.37□□□□□ -0.43
Trub1Q8C0D0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Gm11511-201ENSMUST00000118146 540 ntBASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Gm25700-201ENSMUST00000177693 110 ntBASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Gm44967-201ENSMUST00000207047 631 ntBASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Olfr582-201ENSMUST00000098212 960 ntBASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trub1Q8C0D0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms