Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Gm14660-201ENSMUST00000119809 575 ntBASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Mir1982-201ENSMUST00000157368 74 ntBASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc44a2Q8BY89 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gm9022-201ENSMUST00000182482 992 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc44a2Q8BY89 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc44a2Q8BY89 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc44a2Q8BY89 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Slc44a2Q8BY89 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc44a2Q8BY89 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc44a2Q8BY89 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc44a2Q8BY89 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Slc44a2Q8BY89 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms