Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.51□□□□□ -0.57
Vrk1Q80X41 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vrk1Q80X41 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Gm13809-201ENSMUST00000117921 597 ntBASIC11.5□□□□□ -0.57
Vrk1Q80X41 Gm13888-201ENSMUST00000119148 422 ntBASIC11.5□□□□□ -0.57
Vrk1Q80X41 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.5□□□□□ -0.57
Vrk1Q80X41 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Gm28686-201ENSMUST00000187404 609 ntBASIC11.5□□□□□ -0.57
Vrk1Q80X41 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.5□□□□□ -0.57
Vrk1Q80X41 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.5□□□□□ -0.57
Vrk1Q80X41 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.5□□□□□ -0.57
Vrk1Q80X41 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Vrk1Q80X41 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.5□□□□□ -0.57
Vrk1Q80X41 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.49□□□□□ -0.57
Vrk1Q80X41 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm8199-201ENSMUST00000121323 823 ntBASIC11.49□□□□□ -0.57
Vrk1Q80X41 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm15881-201ENSMUST00000148792 942 ntBASIC11.49□□□□□ -0.57
Vrk1Q80X41 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Mir7686-201ENSMUST00000200604 57 ntBASIC11.49□□□□□ -0.57
Vrk1Q80X41 Gm8956-201ENSMUST00000203939 825 ntBASIC11.49□□□□□ -0.57
Vrk1Q80X41 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.49□□□□□ -0.57
Vrk1Q80X41 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vrk1Q80X41 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms