Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm37207-201ENSMUST00000194284 296 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm37452-201ENSMUST00000194416 1160 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm2566-201ENSMUST00000201267 431 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm18466-201ENSMUST00000209147 499 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rif1Q6PR54 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.18□□□□□ -0.78
Rif1Q6PR54 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm13192-201ENSMUST00000101199 208 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm10443-201ENSMUST00000119024 210 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm21577-201ENSMUST00000190823 697 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm20802-201ENSMUST00000190832 698 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm20568-201ENSMUST00000197129 208 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm5714-201ENSMUST00000197343 566 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm2448-201ENSMUST00000207080 559 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm26670-202ENSMUST00000226862 340 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm26313-201ENSMUST00000157770 308 ntBASIC10.17□□□□□ -0.78
Rif1Q6PR54 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.17□□□□□ -0.78
Rif1Q6PR54 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm12961-201ENSMUST00000120507 1050 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm15982-201ENSMUST00000121681 554 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Gm18042-201ENSMUST00000219887 790 ntBASIC10.16□□□□□ -0.78
Rif1Q6PR54 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rif1Q6PR54 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms