Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Mir6977-201ENSMUST00000184960 64 ntBASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gm28693-202ENSMUST00000190758 331 ntBASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rnf220Q6PDX6 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Gm13813-201ENSMUST00000120998 787 ntBASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Gm45668-201ENSMUST00000211271 493 ntBASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rnf220Q6PDX6 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Gm12928-201ENSMUST00000117115 573 ntBASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Gm8463-201ENSMUST00000208573 613 ntBASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rnf220Q6PDX6 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms