Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcc2Q6PDG5 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcc2Q6PDG5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Gm17931-201ENSMUST00000208132 634 ntBASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcc2Q6PDG5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gm13296-201ENSMUST00000117854 997 ntBASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gm44262-201ENSMUST00000204969 372 ntBASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gm45224-201ENSMUST00000208203 414 ntBASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.01□□□□□ -0.17
Smarcc2Q6PDG5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smarcc2Q6PDG5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms