Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
VcanQ62059 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.95□□□□□ -0.66
VcanQ62059 Gm7833-201ENSMUST00000183288 990 ntBASIC10.95□□□□□ -0.66
VcanQ62059 Gm5291-201ENSMUST00000201965 899 ntBASIC10.95□□□□□ -0.66
VcanQ62059 Wbp1-209ENSMUST00000205023 716 ntBASIC10.95□□□□□ -0.66
VcanQ62059 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.95□□□□□ -0.66
VcanQ62059 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.95□□□□□ -0.66
VcanQ62059 Gm27149-201ENSMUST00000184716 1266 ntBASIC10.95□□□□□ -0.66
VcanQ62059 Gm7504-201ENSMUST00000201449 424 ntBASIC10.95□□□□□ -0.66
VcanQ62059 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
VcanQ62059 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
VcanQ62059 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
VcanQ62059 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
VcanQ62059 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.95□□□□□ -0.66
VcanQ62059 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VcanQ62059 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.94□□□□□ -0.66
VcanQ62059 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VcanQ62059 Gm3150-201ENSMUST00000166418 204 ntBASIC10.94□□□□□ -0.66
VcanQ62059 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.94□□□□□ -0.66
VcanQ62059 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Gm6158-201ENSMUST00000109467 904 ntBASIC10.94□□□□□ -0.66
VcanQ62059 Gm14524-201ENSMUST00000121066 683 ntBASIC10.94□□□□□ -0.66
VcanQ62059 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC10.94□□□□□ -0.66
VcanQ62059 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC10.94□□□□□ -0.66
VcanQ62059 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
VcanQ62059 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.94□□□□□ -0.66
VcanQ62059 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.94□□□□□ -0.66
VcanQ62059 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.94□□□□□ -0.66
VcanQ62059 Krtap6-3-201ENSMUST00000079151 444 ntBASIC10.94□□□□□ -0.66
VcanQ62059 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
VcanQ62059 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.94□□□□□ -0.66
VcanQ62059 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.94□□□□□ -0.66
VcanQ62059 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.94□□□□□ -0.66
VcanQ62059 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Gm18621-201ENSMUST00000222677 679 ntBASIC10.94□□□□□ -0.66
VcanQ62059 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
VcanQ62059 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VcanQ62059 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
VcanQ62059 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.93□□□□□ -0.66
VcanQ62059 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Gm11473-201ENSMUST00000118980 359 ntBASIC10.93□□□□□ -0.66
VcanQ62059 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VcanQ62059 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
VcanQ62059 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
VcanQ62059 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
VcanQ62059 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.93□□□□□ -0.66
VcanQ62059 Mir1190-201ENSMUST00000116925 96 ntBASIC10.93□□□□□ -0.66
VcanQ62059 Gm43117-201ENSMUST00000198531 379 ntBASIC10.93□□□□□ -0.66
VcanQ62059 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms