Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Gm11663-201ENSMUST00000117888 290 ntBASIC12.5□□□□□ -0.41
Smarcd1Q61466 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.5□□□□□ -0.41
Smarcd1Q61466 Gm11941-201ENSMUST00000119904 610 ntBASIC12.5□□□□□ -0.41
Smarcd1Q61466 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Gm18753-201ENSMUST00000201000 566 ntBASIC12.5□□□□□ -0.41
Smarcd1Q61466 Gm10288-201ENSMUST00000084614 537 ntBASIC12.5□□□□□ -0.41
Smarcd1Q61466 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.5□□□□□ -0.41
Smarcd1Q61466 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Smarcd1Q61466 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.49□□□□□ -0.41
Smarcd1Q61466 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Gm24891-201ENSMUST00000104391 136 ntBASIC12.49□□□□□ -0.41
Smarcd1Q61466 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Mir6979-201ENSMUST00000183927 56 ntBASIC12.49□□□□□ -0.41
Smarcd1Q61466 Gm27530-201ENSMUST00000184096 98 ntBASIC12.49□□□□□ -0.41
Smarcd1Q61466 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.49□□□□□ -0.41
Smarcd1Q61466 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.49□□□□□ -0.41
Smarcd1Q61466 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.49□□□□□ -0.41
Smarcd1Q61466 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd1Q61466 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Gm7851-201ENSMUST00000117574 323 ntBASIC12.48□□□□□ -0.41
Smarcd1Q61466 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Mir3102-201ENSMUST00000175555 104 ntBASIC12.48□□□□□ -0.41
Smarcd1Q61466 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Gm43378-201ENSMUST00000199336 582 ntBASIC12.48□□□□□ -0.41
Smarcd1Q61466 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms