Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tnfaip3Q60769 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gm23949-201ENSMUST00000104027 127 ntBASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gm12266-201ENSMUST00000120311 962 ntBASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gm28450-201ENSMUST00000187349 638 ntBASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gm17827-201ENSMUST00000211825 742 ntBASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.35□□□□□ -0.59
Tnfaip3Q60769 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.35□□□□□ -0.59
Tnfaip3Q60769 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm11511-201ENSMUST00000118146 540 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm12217-201ENSMUST00000118858 696 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm12380-201ENSMUST00000119012 544 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm14247-201ENSMUST00000120950 237 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm17040-202ENSMUST00000170597 889 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Mir6927-201ENSMUST00000184494 71 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm18038-201ENSMUST00000197900 485 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Tnfaip3Q60769 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms