Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm25063-201ENSMUST00000104666 94 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm18367-201ENSMUST00000176139 600 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm5621-201ENSMUST00000187303 640 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 CT009754.4-201ENSMUST00000221430 565 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85aQ5SP85 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Gm11980-201ENSMUST00000121445 986 ntBASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc85aQ5SP85 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc85aQ5SP85 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms