Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trafd1Q3UDK1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trafd1Q3UDK1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trafd1Q3UDK1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.98□□□□□ -0.49
Trafd1Q3UDK1 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.98□□□□□ -0.49
Trafd1Q3UDK1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trafd1Q3UDK1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trafd1Q3UDK1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trafd1Q3UDK1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm15610-201ENSMUST00000120584 195 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm37259-201ENSMUST00000193903 849 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm44364-201ENSMUST00000198368 141 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm18056-201ENSMUST00000207670 568 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm18061-201ENSMUST00000208350 562 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm18063-201ENSMUST00000208529 568 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm18052-201ENSMUST00000208750 559 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trafd1Q3UDK1 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Trafd1Q3UDK1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trafd1Q3UDK1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trafd1Q3UDK1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trafd1Q3UDK1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trafd1Q3UDK1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.95□□□□□ -0.5
Trafd1Q3UDK1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trafd1Q3UDK1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trafd1Q3UDK1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trafd1Q3UDK1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms