Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC9.84□□□□□ -0.83
Trim63Q38HM4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gm27300-201ENSMUST00000184085 97 ntBASIC9.84□□□□□ -0.83
Trim63Q38HM4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gm27335-201ENSMUST00000184758 97 ntBASIC9.84□□□□□ -0.83
Trim63Q38HM4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim63Q38HM4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.84□□□□□ -0.83
Trim63Q38HM4 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.83□□□□□ -0.84
Trim63Q38HM4 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.83□□□□□ -0.84
Trim63Q38HM4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 AV026068-213ENSMUST00000223675 1171 ntBASIC9.83□□□□□ -0.84
Trim63Q38HM4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim63Q38HM4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim63Q38HM4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms