Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Msx3P70354 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.34□□□□□ -0.43
Msx3P70354 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.34□□□□□ -0.43
Msx3P70354 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Msx3P70354 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Msx3P70354 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.34□□□□□ -0.43
Msx3P70354 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.34□□□□□ -0.43
Msx3P70354 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.34□□□□□ -0.43
Msx3P70354 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.34□□□□□ -0.43
Msx3P70354 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.34□□□□□ -0.43
Msx3P70354 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Msx3P70354 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Msx3P70354 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.34□□□□□ -0.43
Msx3P70354 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Msx3P70354 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.33□□□□□ -0.43
Msx3P70354 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.43
Msx3P70354 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Msx3P70354 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Msx3P70354 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Msx3P70354 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.33□□□□□ -0.44
Msx3P70354 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Gm14109-201ENSMUST00000118814 309 ntBASIC12.33□□□□□ -0.44
Msx3P70354 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.33□□□□□ -0.44
Msx3P70354 Gm27046-201ENSMUST00000182160 463 ntBASIC12.33□□□□□ -0.44
Msx3P70354 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.33□□□□□ -0.44
Msx3P70354 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.33□□□□□ -0.44
Msx3P70354 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.33□□□□□ -0.44
Msx3P70354 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.33□□□□□ -0.44
Msx3P70354 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.33□□□□□ -0.44
Msx3P70354 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.33□□□□□ -0.44
Msx3P70354 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.33□□□□□ -0.44
Msx3P70354 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.33□□□□□ -0.44
Msx3P70354 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Msx3P70354 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.32□□□□□ -0.44
Msx3P70354 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Msx3P70354 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Msx3P70354 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Msx3P70354 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.32□□□□□ -0.44
Msx3P70354 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Msx3P70354 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.32□□□□□ -0.44
Msx3P70354 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Msx3P70354 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.32□□□□□ -0.44
Msx3P70354 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Msx3P70354 Gm6963-201ENSMUST00000147879 379 ntBASIC12.32□□□□□ -0.44
Msx3P70354 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.32□□□□□ -0.44
Msx3P70354 Gm6114-201ENSMUST00000182472 968 ntBASIC12.32□□□□□ -0.44
Msx3P70354 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.32□□□□□ -0.44
Msx3P70354 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.32□□□□□ -0.44
Msx3P70354 Gm18893-201ENSMUST00000198416 943 ntBASIC12.32□□□□□ -0.44
Msx3P70354 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.32□□□□□ -0.44
Msx3P70354 Gm45598-202ENSMUST00000210719 986 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms