Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm24830-201ENSMUST00000102024 166 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm15276-201ENSMUST00000145953 498 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.04□□□□□ -0.8
Pdlim4P70271 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Gm26232-201ENSMUST00000083360 166 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.04□□□□□ -0.8
Pdlim4P70271 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pdlim4P70271 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pdlim4P70271 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.03□□□□□ -0.8
Pdlim4P70271 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.03□□□□□ -0.8
Pdlim4P70271 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.03□□□□□ -0.8
Pdlim4P70271 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm26083-201ENSMUST00000157904 193 ntBASIC10.03□□□□□ -0.8
Pdlim4P70271 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm37259-201ENSMUST00000193903 849 ntBASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.03□□□□□ -0.8
Pdlim4P70271 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Gm6082-201ENSMUST00000215204 454 ntBASIC10.03□□□□□ -0.8
Pdlim4P70271 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pdlim4P70271 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Pdlim4P70271 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim4P70271 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim4P70271 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim4P70271 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Pdlim4P70271 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.8
Pdlim4P70271 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.02□□□□□ -0.8
Pdlim4P70271 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim4P70271 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim4P70271 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Pdlim4P70271 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim4P70271 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pdlim4P70271 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms