Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pdx1P52946 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Pdx1P52946 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.87□□□□□ -0.51
Pdx1P52946 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Gm5616-201ENSMUST00000165252 384 ntBASIC11.87□□□□□ -0.51
Pdx1P52946 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.87□□□□□ -0.51
Pdx1P52946 Gm8741-201ENSMUST00000174736 384 ntBASIC11.87□□□□□ -0.51
Pdx1P52946 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.87□□□□□ -0.51
Pdx1P52946 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdx1P52946 Gm37666-201ENSMUST00000194110 866 ntBASIC11.87□□□□□ -0.51
Pdx1P52946 Gm45186-201ENSMUST00000206874 478 ntBASIC11.87□□□□□ -0.51
Pdx1P52946 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdx1P52946 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
Pdx1P52946 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdx1P52946 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Pdx1P52946 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pdx1P52946 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pdx1P52946 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.86□□□□□ -0.51
Pdx1P52946 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pdx1P52946 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.86□□□□□ -0.51
Pdx1P52946 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Gm45433-201ENSMUST00000209386 247 ntBASIC11.86□□□□□ -0.51
Pdx1P52946 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.86□□□□□ -0.51
Pdx1P52946 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pdx1P52946 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.86□□□□□ -0.51
Pdx1P52946 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.86□□□□□ -0.51
Pdx1P52946 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pdx1P52946 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.86□□□□□ -0.51
Pdx1P52946 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pdx1P52946 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.85□□□□□ -0.51
Pdx1P52946 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pdx1P52946 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.85□□□□□ -0.51
Pdx1P52946 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.85□□□□□ -0.51
Pdx1P52946 Gm24749-201ENSMUST00000157838 343 ntBASIC11.85□□□□□ -0.51
Pdx1P52946 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.85□□□□□ -0.51
Pdx1P52946 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.85□□□□□ -0.51
Pdx1P52946 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.85□□□□□ -0.51
Pdx1P52946 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Pdx1P52946 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.85□□□□□ -0.51
Pdx1P52946 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.85□□□□□ -0.51
Pdx1P52946 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pdx1P52946 Pck2-205ENSMUST00000226352 2784 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms