Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-2P42580 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-2P42580 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Nkx1-2P42580 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-2P42580 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.76□□□□□ -0.05
Nkx1-2P42580 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx1-2P42580 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx1-2P42580 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 AC154314.2-201ENSMUST00000223677 3502 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gm23912-201ENSMUST00000104687 87 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Rprl1-201ENSMUST00000158050 327 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gm25857-201ENSMUST00000082788 129 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 AC159195.3-201ENSMUST00000225162 2211 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gm7642-201ENSMUST00000216345 1809 ntBASIC14.75□□□□□ -0.05
Nkx1-2P42580 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx1-2P42580 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Morn2-202ENSMUST00000227729 656 ntBASIC14.74□□□□□ -0.05
Nkx1-2P42580 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 AC153506.1-201ENSMUST00000218768 2915 ntBASIC14.74□□□□□ -0.05
Nkx1-2P42580 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.74□□□□□ -0.05
Nkx1-2P42580 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx1-2P42580 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.73□□□□□ -0.05
Nkx1-2P42580 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.73□□□□□ -0.05
Nkx1-2P42580 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx1-2P42580 Gm14247-201ENSMUST00000120950 237 ntBASIC14.73□□□□□ -0.05
Nkx1-2P42580 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms