Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.99□□□□□ -0.49
Nckap1P28660 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Gm19459-201ENSMUST00000176240 835 ntBASIC11.99□□□□□ -0.49
Nckap1P28660 Gm37835-201ENSMUST00000193305 361 ntBASIC11.99□□□□□ -0.49
Nckap1P28660 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.99□□□□□ -0.49
Nckap1P28660 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.99□□□□□ -0.49
Nckap1P28660 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.99□□□□□ -0.49
Nckap1P28660 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nckap1P28660 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nckap1P28660 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.98□□□□□ -0.49
Nckap1P28660 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nckap1P28660 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nckap1P28660 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nckap1P28660 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.98□□□□□ -0.49
Nckap1P28660 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nckap1P28660 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Nckap1P28660 Gm11509-201ENSMUST00000117358 325 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Gm8566-201ENSMUST00000120174 465 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.98□□□□□ -0.49
Nckap1P28660 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nckap1P28660 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Gm7467-201ENSMUST00000185173 652 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nckap1P28660 Ginm1-202ENSMUST00000065124 300 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nckap1P28660 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Nckap1P28660 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.98□□□□□ -0.49
Nckap1P28660 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nckap1P28660 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.98□□□□□ -0.49
Nckap1P28660 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.98□□□□□ -0.49
Nckap1P28660 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.97□□□□□ -0.49
Nckap1P28660 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nckap1P28660 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Nckap1P28660 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Nckap1P28660 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nckap1P28660 Gm15610-201ENSMUST00000120584 195 ntBASIC11.97□□□□□ -0.49
Nckap1P28660 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.97□□□□□ -0.49
Nckap1P28660 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms