Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Zfp28P10078 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Zfp28P10078 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Zfp28P10078 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Zfp28P10078 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Zfp28P10078 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Zfp28P10078 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Zfp28P10078 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Zfp28P10078 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Zfp28P10078 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Zfp28P10078 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Zfp28P10078 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.03□□□□□ -0.64
Zfp28P10078 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.03□□□□□ -0.64
Zfp28P10078 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.03□□□□□ -0.64
Zfp28P10078 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Zfp28P10078 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Zfp28P10078 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Zfp28P10078 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Zfp28P10078 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Zfp28P10078 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Zfp28P10078 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Zfp28P10078 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Zfp28P10078 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Zfp28P10078 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Zfp28P10078 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.02□□□□□ -0.64
Zfp28P10078 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.02□□□□□ -0.65
Zfp28P10078 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.02□□□□□ -0.65
Zfp28P10078 Gm44405-201ENSMUST00000198952 126 ntBASIC11.02□□□□□ -0.65
Zfp28P10078 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.02□□□□□ -0.65
Zfp28P10078 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Zfp28P10078 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Zfp28P10078 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.02□□□□□ -0.65
Zfp28P10078 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Zfp28P10078 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Zfp28P10078 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Zfp28P10078 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Zfp28P10078 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.01□□□□□ -0.65
Zfp28P10078 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Zfp28P10078 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Zfp28P10078 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.01□□□□□ -0.65
Zfp28P10078 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Zfp28P10078 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.01□□□□□ -0.65
Zfp28P10078 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Zfp28P10078 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Zfp28P10078 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.01□□□□□ -0.65
Zfp28P10078 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.01□□□□□ -0.65
Zfp28P10078 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Zfp28P10078 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Zfp28P10078 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.01□□□□□ -0.65
Zfp28P10078 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Zfp28P10078 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.01□□□□□ -0.65
Zfp28P10078 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Zfp28P10078 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms