Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.84□□□□□ -0.51
ClppO88696 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClppO88696 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ClppO88696 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClppO88696 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.83□□□□□ -0.51
ClppO88696 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
ClppO88696 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
ClppO88696 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
ClppO88696 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.83□□□□□ -0.52
ClppO88696 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.83□□□□□ -0.52
ClppO88696 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ClppO88696 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.83□□□□□ -0.52
ClppO88696 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.83□□□□□ -0.52
ClppO88696 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.83□□□□□ -0.52
ClppO88696 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.83□□□□□ -0.52
ClppO88696 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
ClppO88696 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.83□□□□□ -0.52
ClppO88696 Gm24845-201ENSMUST00000158034 109 ntBASIC11.83□□□□□ -0.52
ClppO88696 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
ClppO88696 Gm25700-201ENSMUST00000177693 110 ntBASIC11.83□□□□□ -0.52
ClppO88696 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.83□□□□□ -0.52
ClppO88696 Gm37986-201ENSMUST00000193285 383 ntBASIC11.83□□□□□ -0.52
ClppO88696 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.83□□□□□ -0.52
ClppO88696 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.83□□□□□ -0.52
ClppO88696 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.83□□□□□ -0.52
ClppO88696 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ClppO88696 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
ClppO88696 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
ClppO88696 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClppO88696 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.82□□□□□ -0.52
ClppO88696 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
ClppO88696 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ClppO88696 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ClppO88696 Gm14644-201ENSMUST00000116671 647 ntBASIC11.82□□□□□ -0.52
ClppO88696 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.82□□□□□ -0.52
ClppO88696 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.82□□□□□ -0.52
ClppO88696 Rmrp-201ENSMUST00000157463 271 ntBASIC11.82□□□□□ -0.52
ClppO88696 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.82□□□□□ -0.52
ClppO88696 Mir5120-201ENSMUST00000175020 78 ntBASIC11.82□□□□□ -0.52
ClppO88696 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.82□□□□□ -0.52
ClppO88696 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.82□□□□□ -0.52
ClppO88696 Gm45598-202ENSMUST00000210719 986 ntBASIC11.82□□□□□ -0.52
ClppO88696 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.82□□□□□ -0.52
ClppO88696 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Gm8385-201ENSMUST00000058999 643 ntBASIC11.82□□□□□ -0.52
ClppO88696 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ClppO88696 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClppO88696 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms