Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Gm25881-201ENSMUST00000157783 103 ntBASIC12.52□□□□□ -0.41
Ebf3O08791 Gm23119-201ENSMUST00000158610 140 ntBASIC12.52□□□□□ -0.41
Ebf3O08791 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Ebf3O08791 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ebf3O08791 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.52□□□□□ -0.41
Ebf3O08791 Gm1821-202ENSMUST00000227415 750 ntBASIC12.52□□□□□ -0.41
Ebf3O08791 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ebf3O08791 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.52□□□□□ -0.41
Ebf3O08791 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.52□□□□□ -0.41
Ebf3O08791 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ebf3O08791 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ebf3O08791 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ebf3O08791 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ebf3O08791 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.51□□□□□ -0.41
Ebf3O08791 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.51□□□□□ -0.41
Ebf3O08791 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.51□□□□□ -0.41
Ebf3O08791 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Gm5455-201ENSMUST00000058710 715 ntBASIC12.51□□□□□ -0.41
Ebf3O08791 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ebf3O08791 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ebf3O08791 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.51□□□□□ -0.41
Ebf3O08791 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.51□□□□□ -0.41
Ebf3O08791 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.51□□□□□ -0.41
Ebf3O08791 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Ebf3O08791 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ebf3O08791 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ebf3O08791 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm23596-201ENSMUST00000104304 132 ntBASIC12.5□□□□□ -0.41
Ebf3O08791 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm12196-201ENSMUST00000120954 262 ntBASIC12.5□□□□□ -0.41
Ebf3O08791 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.5□□□□□ -0.41
Ebf3O08791 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Ebf3O08791 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.5□□□□□ -0.41
Ebf3O08791 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.5□□□□□ -0.41
Ebf3O08791 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.5□□□□□ -0.41
Ebf3O08791 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.5□□□□□ -0.41
Ebf3O08791 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.5□□□□□ -0.41
Ebf3O08791 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ebf3O08791 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms