Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Gm24279-201ENSMUST00000104236 131 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Gm12194-201ENSMUST00000117756 1012 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Gm15196-201ENSMUST00000121406 482 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Mir432-201ENSMUST00000157230 75 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Gm27956-201ENSMUST00000175604 260 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Gm7238-201ENSMUST00000206467 973 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 AC162932.1-201ENSMUST00000219209 872 ntBASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scaf11E9PZM7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scaf11E9PZM7 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Gm17709-201ENSMUST00000174536 1096 ntBASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Gm4895-201ENSMUST00000181646 1137 ntBASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Gm7627-201ENSMUST00000183205 999 ntBASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scaf11E9PZM7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Gm15610-201ENSMUST00000120584 195 ntBASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC16.51■□□□□ 0.23
Scaf11E9PZM7 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Gm45310-201ENSMUST00000210436 275 ntBASIC16.51■□□□□ 0.23
Scaf11E9PZM7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Gm8038-201ENSMUST00000164674 2044 ntBASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scaf11E9PZM7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Scaf11E9PZM7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scaf11E9PZM7 Gm18642-201ENSMUST00000206642 1400 ntBASIC16.5■□□□□ 0.23
Scaf11E9PZM7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC16.5■□□□□ 0.23
Scaf11E9PZM7 Gm37348-201ENSMUST00000193104 1789 ntBASIC16.5■□□□□ 0.23
Scaf11E9PZM7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scaf11E9PZM7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms