Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm23612-201ENSMUST00000103823 110 ntBASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm23576-201ENSMUST00000179918 110 ntBASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm5870-201ENSMUST00000196461 282 ntBASIC12.11□□□□□ -0.47
Col4a6B1AVK5 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a6B1AVK5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm13284-201ENSMUST00000121020 547 ntBASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.1□□□□□ -0.47
Col4a6B1AVK5 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm6423-201ENSMUST00000204315 934 ntBASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Lect2-202ENSMUST00000225183 823 ntBASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm15329-201ENSMUST00000121408 155 ntBASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm24328-201ENSMUST00000175104 67 ntBASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col4a6B1AVK5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col4a6B1AVK5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms