Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cfap99A0A140LIX9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm22133-201ENSMUST00000102082 109 ntBASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm12165-201ENSMUST00000117047 342 ntBASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm13035-201ENSMUST00000117496 342 ntBASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm15515-201ENSMUST00000117827 822 ntBASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm5369-201ENSMUST00000217499 588 ntBASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cfap99A0A140LIX9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Gm11989-201ENSMUST00000117240 672 ntBASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Gm11362-201ENSMUST00000118838 850 ntBASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Mir7677-201ENSMUST00000184226 67 ntBASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Gm21811-201ENSMUST00000096485 930 ntBASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cfap99A0A140LIX9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Gm11941-201ENSMUST00000119904 610 ntBASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Gm18304-201ENSMUST00000189162 546 ntBASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Gm44126-201ENSMUST00000204831 514 ntBASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfap99A0A140LIX9 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms