Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Gm23119-201ENSMUST00000158610 140 ntBASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Gm39404-201ENSMUST00000216350 313 ntBASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Trav5-4A0A075B652 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm6023-201ENSMUST00000118217 606 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Mir1982-201ENSMUST00000157368 74 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm5370-201ENSMUST00000187187 574 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm37201-201ENSMUST00000191845 523 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.1□□□□□ -0.79
Trav5-4A0A075B652 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.09□□□□□ -0.79
Trav5-4A0A075B652 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms