Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.04□□□□□ -0.48
Scn8aQ9WTU3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm18367-201ENSMUST00000176139 600 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm17831-201ENSMUST00000205579 900 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm19459-201ENSMUST00000176240 835 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm43916-201ENSMUST00000205062 967 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Gm29787-201ENSMUST00000222129 849 ntBASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Scn8aQ9WTU3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Scn8aQ9WTU3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn8aQ9WTU3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn8aQ9WTU3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn8aQ9WTU3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Scn8aQ9WTU3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.02□□□□□ -0.48
Scn8aQ9WTU3 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
Scn8aQ9WTU3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm11783-201ENSMUST00000119549 885 ntBASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm37986-201ENSMUST00000193285 383 ntBASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Scn8aQ9WTU3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms