Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Gm13875-201ENSMUST00000120162 282 ntBASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Gm42599-201ENSMUST00000201308 469 ntBASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chaf1aQ9QWF0 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Gm12314-201ENSMUST00000118104 538 ntBASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chaf1aQ9QWF0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Gm14660-201ENSMUST00000119809 575 ntBASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Gm13342-201ENSMUST00000121055 207 ntBASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.49□□□□□ -0.25
Chaf1aQ9QWF0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms