Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.56□□□□□ -0.56
Upk3aQ9JKX8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm15236-201ENSMUST00000117309 379 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Mir7677-201ENSMUST00000184226 67 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm26448-201ENSMUST00000082446 203 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Upk3aQ9JKX8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Pck2-205ENSMUST00000226352 2784 ntBASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Gm18056-201ENSMUST00000207670 568 ntBASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Gm18061-201ENSMUST00000208350 562 ntBASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Gm18063-201ENSMUST00000208529 568 ntBASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Gm18052-201ENSMUST00000208750 559 ntBASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Upk3aQ9JKX8 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms