Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm37201-201ENSMUST00000191845 523 ntBASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm18187-201ENSMUST00000196476 984 ntBASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm18711-201ENSMUST00000199341 750 ntBASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm6266-201ENSMUST00000203844 806 ntBASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Snf8Q9CZ28 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.37□□□□□ -0.43
Snf8Q9CZ28 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm12058-201ENSMUST00000118614 437 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Gm15824-201ENSMUST00000119516 955 ntBASIC12.36□□□□□ -0.43
Snf8Q9CZ28 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Snf8Q9CZ28 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms