Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Gm15806-201ENSMUST00000120696 955 ntBASIC11.14□□□□□ -0.63
Trim13Q9CYB0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Gm9002-201ENSMUST00000178437 499 ntBASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.14□□□□□ -0.63
Trim13Q9CYB0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim13Q9CYB0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Gm11478-201ENSMUST00000117851 599 ntBASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.13□□□□□ -0.63
Trim13Q9CYB0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Gm10012-201ENSMUST00000078252 192 ntBASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim13Q9CYB0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.12□□□□□ -0.63
Trim13Q9CYB0 Gm13492-201ENSMUST00000119772 665 ntBASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms