Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Gm11618-201ENSMUST00000117946 267 ntBASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Gm16296-201ENSMUST00000159905 325 ntBASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Gm7287-201ENSMUST00000205267 602 ntBASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Smurf1Q9CUN6 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm11814-201ENSMUST00000119515 929 ntBASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm8463-201ENSMUST00000208573 613 ntBASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Btrc-209ENSMUST00000224478 2194 ntBASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Smurf1Q9CUN6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smurf1Q9CUN6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms