Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldnd1Q9CQX5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldnd1Q9CQX5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cldnd1Q9CQX5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cldnd1Q9CQX5 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cldnd1Q9CQX5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.29□□□□□ -0.44
Cldnd1Q9CQX5 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cldnd1Q9CQX5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm12943-201ENSMUST00000119616 210 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm8451-201ENSMUST00000170338 447 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm18201-201ENSMUST00000174735 875 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm9136-201ENSMUST00000193368 454 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm18514-201ENSMUST00000218980 436 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm8894-201ENSMUST00000074642 666 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm7536-201ENSMUST00000077389 444 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gm5453-201ENSMUST00000080866 447 ntBASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldnd1Q9CQX5 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldnd1Q9CQX5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Gm12218-201ENSMUST00000117666 399 ntBASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Gm42816-201ENSMUST00000198433 325 ntBASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Gm23105-201ENSMUST00000083719 134 ntBASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldnd1Q9CQX5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldnd1Q9CQX5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldnd1Q9CQX5 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms