Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Gm44967-201ENSMUST00000207047 631 ntBASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Gm6082-201ENSMUST00000215204 454 ntBASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpa3Q9CQ71 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpa3Q9CQ71 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm13296-201ENSMUST00000117854 997 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm12036-201ENSMUST00000120008 530 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm15610-201ENSMUST00000120584 195 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm25890-201ENSMUST00000177643 165 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm22614-201ENSMUST00000178300 165 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm22042-201ENSMUST00000082989 165 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Gm26110-201ENSMUST00000083971 165 ntBASIC12.72□□□□□ -0.37
Rpa3Q9CQ71 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms