Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.95□□□□□ -0.18
Smc1bQ920F6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.95□□□□□ -0.18
Smc1bQ920F6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.95□□□□□ -0.18
Smc1bQ920F6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.94□□□□□ -0.18
Smc1bQ920F6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Gm23251-201ENSMUST00000103773 110 ntBASIC13.94□□□□□ -0.18
Smc1bQ920F6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.94□□□□□ -0.18
Smc1bQ920F6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.94□□□□□ -0.18
Smc1bQ920F6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.94□□□□□ -0.18
Smc1bQ920F6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Gm45550-201ENSMUST00000209380 946 ntBASIC13.94□□□□□ -0.18
Smc1bQ920F6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smc1bQ920F6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Gm12795-201ENSMUST00000117594 539 ntBASIC13.93□□□□□ -0.18
Smc1bQ920F6 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Gm29155-201ENSMUST00000185910 269 ntBASIC13.93□□□□□ -0.18
Smc1bQ920F6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.93□□□□□ -0.18
Smc1bQ920F6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smc1bQ920F6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms