Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.36□□□□□ -0.59
Clrn1Q8K445 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm17376-201ENSMUST00000166016 84 ntBASIC11.35□□□□□ -0.59
Clrn1Q8K445 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm37259-201ENSMUST00000193903 849 ntBASIC11.35□□□□□ -0.59
Clrn1Q8K445 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Rprl1-202ENSMUST00000198476 238 ntBASIC11.35□□□□□ -0.59
Clrn1Q8K445 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm19187-201ENSMUST00000206781 892 ntBASIC11.35□□□□□ -0.59
Clrn1Q8K445 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.35□□□□□ -0.59
Clrn1Q8K445 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.35□□□□□ -0.59
Clrn1Q8K445 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Clrn1Q8K445 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clrn1Q8K445 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.34□□□□□ -0.59
Clrn1Q8K445 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm22323-201ENSMUST00000103832 109 ntBASIC11.34□□□□□ -0.59
Clrn1Q8K445 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.34□□□□□ -0.59
Clrn1Q8K445 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm45598-202ENSMUST00000210719 986 ntBASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm13097-201ENSMUST00000210722 397 ntBASIC11.34□□□□□ -0.59
Clrn1Q8K445 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Gm6082-201ENSMUST00000215204 454 ntBASIC11.34□□□□□ -0.59
Clrn1Q8K445 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clrn1Q8K445 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms