Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trerf1Q8BXJ2 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Gm13875-201ENSMUST00000120162 282 ntBASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Gm11597-201ENSMUST00000121423 964 ntBASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Gm2991-201ENSMUST00000173338 480 ntBASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trerf1Q8BXJ2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm13315-201ENSMUST00000120376 991 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm13350-201ENSMUST00000120519 479 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Rmrp-201ENSMUST00000157463 271 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm38341-201ENSMUST00000195357 515 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm26035-201ENSMUST00000083065 308 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trerf1Q8BXJ2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trerf1Q8BXJ2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms