Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col16a1Q8BLX7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm15528-201ENSMUST00000117821 864 ntBASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm42430-201ENSMUST00000197209 616 ntBASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm29763-201ENSMUST00000205306 616 ntBASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col16a1Q8BLX7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm45085-201ENSMUST00000209100 441 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 AC158388.3-202ENSMUST00000225517 775 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm22846-201ENSMUST00000157706 270 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm25604-201ENSMUST00000158359 133 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm23694-201ENSMUST00000179335 110 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Gm4895-201ENSMUST00000181646 1137 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 AC134248.1-201ENSMUST00000216113 1176 ntBASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col16a1Q8BLX7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col16a1Q8BLX7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms